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Introduction
There’s nothing like the warm, spiced aroma of Pumpkin Bran Muffins baking in the oven! These muffins are packed with fiber, naturally sweetened, and bursting with fall flavors. Whether you need a quick breakfast, a healthy snack, or a meal-prep-friendly treat, this recipe has you covered.
Made with wholesome ingredients like bran cereal, flaxseed, pumpkin puree, and warm spices, these muffins are soft, moist, and satisfying. Plus, they’re dairy-free and packed with fiber to keep you full and energized.
If you love breakfast recipes, you might also enjoy these cozy classics: Heart-Shaped Grilled Cheese Sandwiches, Classic French Toast, and French Omelette with Fines Herbes.
Why You’ll Love This Recipe
Key Benefits
- Quick & Easy – Ready in just 35 minutes with simple ingredients
- Nutritious – High in fiber, vitamins, and minerals thanks to bran cereal, flaxseed, and pumpkin
- Naturally Sweetened – No refined sugar, just a touch of coconut sugar for sweetness
- Dairy-Free & Easily Adaptable – Can be made vegan or gluten-free with simple swaps
Taste & Texture
- Moist & Tender – Thanks to the pumpkin puree and almond milk
- Nutty & Crunchy – Chopped pecans add a delightful crunch on top
- Warm & Spiced – Hints of cinnamon, nutmeg, and ginger create a cozy fall flavor
Dietary Attributes
- High in fiber – Great for digestion and keeping you full
- Dairy-free – Made with almond milk instead of dairy
- Low in added sugar – A lightly sweet, wholesome snack
Ingredients & Substitutions
Ingredient List
- 1 ½ cups bran cereal
- 2 cups whole wheat flour
- 1 tbsp ground flaxseed
- 2 ½ tbsp water
- 1 ⅓ cups unsweetened almond milk
- ½ cup coconut sugar (plus more for topping)
- 1 tbsp baking powder
- 1 tsp cinnamon
- 1 ½ tsp pumpkin pie spice
- ¼ tsp nutmeg
- ¼ tsp salt
- ⅓ cup pumpkin puree
- ¼ cup chopped pecans (for topping)
Notes on Quality
- Pumpkin Puree: Use pure pumpkin puree (not pumpkin pie filling) for the best texture and flavor
- Flax Egg: The flaxseed and water mixture replaces eggs, making this recipe plant-based
- Bran Cereal: You can use wheat bran or bran flakes, as both work well for structure and fiber
Possible Substitutions
- Flour Swap: Swap whole wheat flour for gluten-free flour to make this recipe gluten-free
- Sweetener Alternative: Use maple syrup or honey instead of coconut sugar
- Nut-Free Option: Omit the pecans or replace them with pumpkin seeds
Step-by-Step Instructions
1. Preheat & Prepare
Preheat your oven to 400°F and line a muffin tin with paper liners or lightly grease it with oil.
2. Soak the Bran Cereal
In a large mixing bowl, combine the bran cereal and almond milk. Let it sit for a few minutes until the cereal softens.

3. Prepare the Flax Egg
In a small bowl, mix 1 tbsp ground flaxseed with 2 ½ tbsp water. Let it sit for 5 minutes until it thickens.
4. Combine the Dry Ingredients
In a separate bowl, whisk together: whole wheat flour, baking powder, pumpkin pie spice, cinnamon, nutmeg, and salt.
5. Mix the Wet Ingredients
To the softened bran cereal mixture, add the flax egg and pumpkin puree. Stir until fully combined.
6. Combine Wet & Dry Ingredients
Gradually mix the dry ingredients into the wet ingredients, stirring just until combined. (Don’t overmix—this keeps the muffins light and fluffy.)
7. Fill & Top the Muffins
Scoop the batter into the muffin tin, filling each cup halfway. Sprinkle with chopped pecans and a little extra coconut sugar for a crunchy, caramelized topping.
8. Bake & Cool
Bake for 25 minutes, or until the tops spring back when gently pressed. Let the muffins cool for 5 minutes in the pan, then transfer them to a wire rack to cool completely.
Expert Tips & Tricks
Best Practices
- Soaking the bran cereal is crucial—it ensures a moist texture
- Don’t overmix the batter, as this can make the muffins dense
- Use high-quality spices for the best flavor
Common Mistakes
- Skipping the soaking step makes the muffins too dry
- Overbaking can make them tough, so check at 22 minutes with a toothpick
- Not using enough spice can make them taste bland
Time-Saving Tips
- Prep the dry ingredients the night before for quicker assembly
- Make a double batch and freeze for easy breakfasts
Serving Suggestions
Pairings
Enjoy these muffins with a drizzle of almond butter, a side of Greek yogurt, or a cup of warm chai tea.
Presentation Ideas
Serve them on a rustic wooden board with a dusting of cinnamon for a cozy fall aesthetic.
Beverage Pairings
Pair these muffins with spiced coffee, a chai latte, or a glass of oat milk for the ultimate cozy treat.
Storage & Reheating
Leftover Storage
Store in an airtight container at room temperature for up to 3 days. For longer storage, keep in the fridge for up to a week.
Reheating Methods
Warm in the microwave for 15 seconds or in the oven at 300°F for 5 minutes for a fresh-baked taste.
Frequently Asked Questions
Substitutions & Adjustments
Can I use regular milk instead of almond milk?
Yes, any milk will work in this recipe.
Can I use an egg instead of flaxseed?
Yes, substitute the flaxseed and water with one regular egg.
Troubleshooting
Why are my muffins dry?
Make sure to soak the bran cereal properly and avoid overbaking.
Can I freeze these muffins?
Yes! Wrap them individually and freeze for up to 3 months.
Variations & Customizations
Dietary Adaptations
To make these muffins vegan, ensure the sugar is plant-based and use dairy-free milk.
Flavor Twists
Add chocolate chips, dried cranberries, or sunflower seeds for extra flavor.
Seasonal/Holiday Versions
For a holiday twist, mix in orange zest and top with a maple glaze.
Conclusion
Pumpkin Bran Muffins are the perfect balance of cozy flavors and nutritious ingredients. Whether you’re enjoying them with a warm cup of coffee or packing them for a healthy snack, they’re sure to become a staple in your kitchen.
Try this recipe and let me know how it turns out in the comments! You can also find more delicious recipes on my Pinterest: Cooking with Callie. Happy baking!



Pumpkin Bran Muffins – A Healthy and Cozy Fall Treat
- Total Time: 35 minutes
- Yield: 12 muffins 1x
- Diet: Vegetarian
Description
These Pumpkin Bran Muffins are packed with fiber, naturally sweetened, and bursting with cozy fall flavors. Soft, moist, and topped with crunchy pecans, they make the perfect healthy breakfast or snack. Ready in just 35 minutes, they’re dairy-free and can easily be made gluten-free.
Ingredients
- 1 ½ cups bran cereal
- 2 cups whole wheat flour
- 1 tbsp ground flaxseed
- 2 ½ tbsp water
- 1 ⅓ cups unsweetened almond milk
- ½ cup coconut sugar (plus more for topping)
- 1 tbsp baking powder
- 1 tsp cinnamon
- 1 ½ tsp pumpkin pie spice
- ¼ tsp nutmeg
- ¼ tsp salt
- ⅓ cup pumpkin puree
- ¼ cup chopped pecans (for topping)
Instructions
- Preheat the oven to 400°F (200°C) and line a muffin tin with paper liners.
- Soak the bran cereal in almond milk in a large mixing bowl and let it sit until softened.
- Prepare the flax egg by mixing flaxseed with water. Let it sit for 5 minutes until thickened.
- Combine the dry ingredients in a separate bowl: whole wheat flour, baking powder, pumpkin pie spice, cinnamon, nutmeg, and salt.
- Mix the wet ingredients by adding the flax egg and pumpkin puree to the softened bran cereal. Stir to combine.
- Fold in the dry ingredients gently, mixing until just combined.
- Fill the muffin cups halfway with the batter. Top with chopped pecans and a sprinkle of coconut sugar.
- Bake for 25 minutes, or until the tops spring back when pressed lightly.
- Cool for 5 minutes in the pan, then transfer to a wire rack to cool completely.
Notes
- To make these muffins gluten-free, swap whole wheat flour for a 1:1 gluten-free blend.
- Store muffins in an airtight container at room temperature for up to 3 days or refrigerate for up to a week.
- Freeze for up to 3 months and reheat in the oven at 300°F for 5 minutes.
- Prep Time: 10 minutes
- Cook Time: 25 minutes
- Category: Breakfast, Snack
- Method: Baking
- Cuisine: American
Nutrition
- Serving Size: 1 muffin
- Calories: 180
- Sugar: 8g
- Sodium: 120mg
- Fat: 6g
- Saturated Fat: 1g
- Unsaturated Fat: 4g
- Trans Fat: 0g
- Carbohydrates: 28g
- Fiber: 5g
- Protein: 4g
- Cholesterol: 0mg